TY - JOUR
T1 - Improving the Subtype Classification of Non-small Cell Lung Cancer by Elastic Deformation Based Machine Learning
AU - Gao, Yang
AU - Song, Fan
AU - Zhang, Peng
AU - Liu, Jian
AU - Cui, Jingjing
AU - Ma, Yingying
AU - Zhang, Guanglei
AU - Luo, Jianwen
N1 - Publisher Copyright:
© 2021, Society for Imaging Informatics in Medicine.
PY - 2021/6
Y1 - 2021/6
N2 - Non-invasive image-based machine learning models have been used to classify subtypes of non-small cell lung cancer (NSCLC). However, the classification performance is limited by the dataset size, because insufficient data cannot fully represent the characteristics of the tumor lesions. In this work, a data augmentation method named elastic deformation is proposed to artificially enlarge the image dataset of NSCLC patients with two subtypes (squamous cell carcinoma and large cell carcinoma) of 3158 images. Elastic deformation effectively expanded the dataset by generating new images, in which tumor lesions go through elastic shape transformation. To evaluate the proposed method, two classification models were trained on the original and augmented dataset, respectively. Using augmented dataset for training significantly increased classification metrics including area under the curve (AUC) values of receiver operating characteristics (ROC) curves, accuracy, sensitivity, specificity, and f1-score, thus improved the NSCLC subtype classification performance. These results suggest that elastic deformation could be an effective data augmentation method for NSCLC tumor lesion images, and building classification models with the help of elastic deformation has the potential to serve for clinical lung cancer diagnosis and treatment design.
AB - Non-invasive image-based machine learning models have been used to classify subtypes of non-small cell lung cancer (NSCLC). However, the classification performance is limited by the dataset size, because insufficient data cannot fully represent the characteristics of the tumor lesions. In this work, a data augmentation method named elastic deformation is proposed to artificially enlarge the image dataset of NSCLC patients with two subtypes (squamous cell carcinoma and large cell carcinoma) of 3158 images. Elastic deformation effectively expanded the dataset by generating new images, in which tumor lesions go through elastic shape transformation. To evaluate the proposed method, two classification models were trained on the original and augmented dataset, respectively. Using augmented dataset for training significantly increased classification metrics including area under the curve (AUC) values of receiver operating characteristics (ROC) curves, accuracy, sensitivity, specificity, and f1-score, thus improved the NSCLC subtype classification performance. These results suggest that elastic deformation could be an effective data augmentation method for NSCLC tumor lesion images, and building classification models with the help of elastic deformation has the potential to serve for clinical lung cancer diagnosis and treatment design.
KW - Data augmentation
KW - Elastic deformation
KW - Machine learning
KW - Non-small cell lung cancer (NSCLC)
KW - Radiomics
KW - Subtype classification
UR - https://www.scopus.com/pages/publications/85105511952
U2 - 10.1007/s10278-021-00455-0
DO - 10.1007/s10278-021-00455-0
M3 - 文章
C2 - 33963422
AN - SCOPUS:85105511952
SN - 0897-1889
VL - 34
SP - 605
EP - 617
JO - Journal of Digital Imaging
JF - Journal of Digital Imaging
IS - 3
ER -