Are filter methods very effective in gene selection of microarray data?

Zhou Jun Li; Li Juan Zhang; Huo Wang Chen

doi:10.1109/BIBMW.2007.4425406

Are filter methods very effective in gene selection of microarray data?

Zhou Jun Li^*
, Li Juan Zhang
, Huo Wang Chen

^*此作品的通讯作者

计算机学院

National University of Defense Technology

科研成果: 书/报告/会议事项章节 › 会议稿件 › 同行评审

4 引用（Scopus）

摘要

Feature (Gene) selection is a frequently used preprocessing technology for successful cancer classification task in microarray gene expression data analysis. Widely used gene selection approaches are mainly focused on the filter methods. Filter methods are usually considered to be very effective and efficient for high-dimensional data. This paper reviews the existing filter methods, and shows the performance of the representative algorithms on microarray data by extensive experimental study. Surprisingly, the experimental results show that filter methods are not very effective on microarray data. We analyze the cause of the result and provide the basic ideas for potential solutions.

源语言	英语
主期刊名	Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW
出版商	Institute of Electrical and Electronics Engineers Inc.
页	97-100
页数	4
ISBN（印刷版）	9781424416042
DOI	https://doi.org/10.1109/BIBMW.2007.4425406
出版状态	已出版 - 2007
活动	2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW - San Jose, CA, 美国期限: 2 11月 2007 → 4 11月 2007

出版系列

姓名	Proceedings - 2007 IEEE International Conference on Bioinformaticsand Biomedicine Workshops, BIBMW

会议

会议	2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW
国家/地区	美国
市	San Jose, CA
时期	2/11/07 → 4/11/07

联合国可持续发展目标

此成果有助于实现下列可持续发展目标：

可持续发展目标 3 良好健康与福祉

访问文件

10.1109/BIBMW.2007.4425406

其它文件与链接

链接到 Scopus 的出版物

引用此

Li, Z. J., Zhang, L. J., & Chen, H. W. (2007). Are filter methods very effective in gene selection of microarray data? 在 Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW (页码 97-100). 文章 4425406 (Proceedings - 2007 IEEE International Conference on Bioinformaticsand Biomedicine Workshops, BIBMW). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/BIBMW.2007.4425406

Li, Zhou Jun ; Zhang, Li Juan ; Chen, Huo Wang. / Are filter methods very effective in gene selection of microarray data?. Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW. Institute of Electrical and Electronics Engineers Inc., 2007. 页码 97-100 (Proceedings - 2007 IEEE International Conference on Bioinformaticsand Biomedicine Workshops, BIBMW).

@inproceedings{ea0557f76f9a4f5eb69acec539b891f4,

title = "Are filter methods very effective in gene selection of microarray data?",

abstract = "Feature (Gene) selection is a frequently used preprocessing technology for successful cancer classification task in microarray gene expression data analysis. Widely used gene selection approaches are mainly focused on the filter methods. Filter methods are usually considered to be very effective and efficient for high-dimensional data. This paper reviews the existing filter methods, and shows the performance of the representative algorithms on microarray data by extensive experimental study. Surprisingly, the experimental results show that filter methods are not very effective on microarray data. We analyze the cause of the result and provide the basic ideas for potential solutions.",

author = "Li, \{Zhou Jun\} and Zhang, \{Li Juan\} and Chen, \{Huo Wang\}",

year = "2007",

doi = "10.1109/BIBMW.2007.4425406",

language = "英语",

isbn = "9781424416042",

series = "Proceedings - 2007 IEEE International Conference on Bioinformaticsand Biomedicine Workshops, BIBMW",

publisher = "Institute of Electrical and Electronics Engineers Inc.",

pages = "97--100",

booktitle = "Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW",

address = "美国",

note = "2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW ; Conference date: 02-11-2007 Through 04-11-2007",

}

Li, ZJ, Zhang, LJ & Chen, HW 2007, Are filter methods very effective in gene selection of microarray data? 在 Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW., 4425406, Proceedings - 2007 IEEE International Conference on Bioinformaticsand Biomedicine Workshops, BIBMW, Institute of Electrical and Electronics Engineers Inc., 页码 97-100, 2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW, San Jose, CA, 美国, 2/11/07. https://doi.org/10.1109/BIBMW.2007.4425406

Are filter methods very effective in gene selection of microarray data? / Li, Zhou Jun; Zhang, Li Juan; Chen, Huo Wang.
Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW. Institute of Electrical and Electronics Engineers Inc., 2007. 页码 97-100 4425406 (Proceedings - 2007 IEEE International Conference on Bioinformaticsand Biomedicine Workshops, BIBMW).