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Unsupervised learning for cell-level visual representation in histopathology images with generative adversarial networks

  • Bo Hu
  • , Ye Tang
  • , Eric I.Chao Chang
  • , Yubo Fan
  • , Maode Lai
  • , Yan Xu*
  • *Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

The visual attributes of cells, such as the nuclear morphology and chromatin openness, are critical for histopathology image analysis. By learning cell-level visual representation, we can obtain a rich mix of features that are highly reusable for various tasks, such as cell-level classification, nuclei segmentation, and cell counting. In this paper, we propose a unified generative adversarial networks architecture with a new formulation of loss to perform robust cell-level visual representation learning in an unsupervised setting. Our model is not only label-free and easily trained but also capable of cell-level unsupervised classification with interpretable visualization, which achieves promising results in the unsupervised classification of bone marrow cellular components. Based on the proposed cell-level visual representation learning, we further develop a pipeline that exploits the varieties of cellular elements to perform histopathology image classification, the advantages of which are demonstrated on bone marrow datasets.

Original languageEnglish
Article number8402089
Pages (from-to)1316-1328
Number of pages13
JournalIEEE Journal of Biomedical and Health Informatics
Volume23
Issue number3
DOIs
StatePublished - May 2019

Keywords

  • Unsupervised learning
  • cell
  • classification
  • generative adversarial networks
  • representation learning

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