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Mix Contrast for COVID-19 Mild-to-Critical Prediction

  • Yongbei Zhu
  • , Shuo Wang
  • , Siwen Wang
  • , Qingxia Wu
  • , Liusu Wang
  • , Hongjun Li
  • , Meiyun Wang
  • , Meng Niu
  • , Yunfei Zha
  • , Jie Tian*
  • *Corresponding author for this work
  • Beihang University
  • CAS - Institute of Automation
  • Northeastern University China
  • Capital Medical University
  • Henan Provincial People's Hospital
  • First Hospital of China Medical University

Research output: Contribution to journalArticlepeer-review

Abstract

Objective: In a few patients with mild COVID-19, there is a possibility of the infection becoming severe or critical in the future. This work aims to identify high-risk patients who have a high probability of changing from mild to critical COVID-19 (only account for 5% of cases). Methods: Using traditional convolutional neural networks for classification may not be suitable to identify this 5% of high risk patients from an entire dataset due to the highly imbalanced label distribution. To address this problem, we propose a Mix Contrast model, which matches original features with mixed features for contrastive learning. Three modules are proposed for training the model: 1) a cumulative learning strategy for synthesizing the mixed feature; 2) a commutative feature combination module for learning the commutative law of feature concatenation; 3) a united pairwise loss assigning adaptive weights for sample pairs with different class anchors based on their current optimization status. Results: We collect a multi-center computed tomography dataset including 918 confirmed COVID-19 patients from four hospitals and evaluate the proposed method on both the COVID-19 mild-to-critical prediction and COVID-19 diagnosis tasks. For mild-to-critical prediction, the experimental results show a recall of 0.80 and a specificity of 0.815. For diagnosis, the model shows comparable results with deep neural networks using a large dataset. Our method demonstrates improvements when the amount of training data is small or imbalanced. Significance: Identifying mild-to-critical COVID-19 patients is important for early prevention and personalized treatment planning.

Original languageEnglish
Pages (from-to)3725-3736
Number of pages12
JournalIEEE Transactions on Biomedical Engineering
Volume68
Issue number12
DOIs
StatePublished - 1 Dec 2021

Keywords

  • Coronavirus disease 2019 (COVID-19)
  • computed tomography
  • contrastive learning
  • mixup
  • prognosis

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