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High-precision automatic identification method for dicentric chromosome images using two-stage convolutional neural network

  • Xiang Shen
  • , Tengfei Ma
  • , Chaowen Li
  • , Zhanbo Wen
  • , Jinlin Zheng
  • , Zhenggan Zhou*
  • *Corresponding author for this work
  • Beihang University
  • Ltd.

Research output: Contribution to journalArticlepeer-review

Abstract

Dicentric chromosome analysis is the gold standard for biological dose assessment. To enhance the efficiency of biological dose assessment in large-scale radiation catastrophes, automatic identification of dicentric chromosome images is a promising and objective method. In this paper, an automatic identification method for dicentric chromosome images using two-stage convolutional neural network is proposed based on Giemsa-stained automatic microscopic imaging. To automatically segment the adhesive chromosome masses, a k-means based adaptive image segmentation and watershed segmentation algorithm is applied. The first-stage CNN is used to identify the dicentric chromosome images from all the images and the second-stage CNN works to specifically identify the dicentric chromosome images. This two-stage CNN identification method can effectively detects chromosome images with concealed centromeres, poorly expanded and long-armed entangled chromosomes, and tricentric chromosomes. The novel two-stage CNN method has a chromosome identification accuracy of 99.4%, a sensitivity of 85.8% sensitivity, and a specificity of 99.6%, effectively reducing the false positive rate of dicentric chromosome. The analysis speed of this automatic identification method can be 20 times quicker than manual detection, providing a valuable reference for other image identification situations with small target rates.

Original languageEnglish
Article number2124
JournalScientific Reports
Volume13
Issue number1
DOIs
StatePublished - Dec 2023

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