Coarse to Fine Automatic Segmentation of Abdominal Multiple Organs

  • Yi Lv
  • , Yu Ning
  • , Junchen Wang*
  • *Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Abdominal multi-organ segmentation is fast becoming a key instrument in preoperative diagnosis. Using the results of abdominal CT image segmentation for three-dimensional reconstruction is an intuitive and accurate method for surgical planning. In this paper, we propose a stable three-stage fast automatic segmentation method for abdominal 13 organs: liver, spleen, pancreas, right kidney, left kidney, stomach, gallbladder, esophagus, aorta, inferior vena cava, right adrenal gland, left adrenal gland, and duodenum. Our method includes preprocessing the CT data, segmenting the multi-organ and post-processing the segmentation outputs. The results on the test set show that the average DSC performance is about 0.766. The average time and GPU memory consumption for each case is 81.42 s and 1953 MB.

Original languageEnglish
Title of host publicationFast and Low-Resource Semi-supervised Abdominal Organ Segmentation - MICCAI 2022 Challenge, FLARE 2022, Held in Conjunction with MICCAI 2022, Proceedings
EditorsJun Ma, Bo Wang
PublisherSpringer Science and Business Media Deutschland GmbH
Pages223-232
Number of pages10
ISBN (Print)9783031239106
DOIs
StatePublished - 2022
EventInternational challenge on Fast and Lowresource Semi-supervised Abdominal Organ Segmentation in CT Scans, FLARE 2022 held in conjunction with the International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2022 - Singapore, Singapore
Duration: 22 Sep 202222 Sep 2022

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume13816 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

ConferenceInternational challenge on Fast and Lowresource Semi-supervised Abdominal Organ Segmentation in CT Scans, FLARE 2022 held in conjunction with the International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2022
Country/TerritorySingapore
CitySingapore
Period22/09/2222/09/22

Keywords

  • Deep learning
  • Medical image segmentation
  • Neural network

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