Bayesian analysis of folding and unfolding time series of single-forced RNAs

  • Xiao Chuan Xue
  • , Huan Tong
  • , Fei Liu*
  • , Zhong Can Ou-Yang
  • *Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

On the basis of a coarse-grain physical model of the folding and unfolding of single-forced RNAs conducted in light tweezer experiments, we theoretically investigate the feasibility of inferring the RNA's intrinsic kinetic parameters from the noisy time series of the molecule's extension. A Bayesian approach using Monte Carlo Markov Chain is proposed. We prove that this statistical approach is efficient and accurate in inferring the molecule's physical parameters, even if the experimental data are yielded under a narrow range of forces.

Original languageEnglish
Pages (from-to)13680-13683
Number of pages4
JournalJournal of Physical Chemistry B
Volume112
Issue number44
DOIs
StatePublished - 6 Nov 2008
Externally publishedYes

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